Databases

SLT (spliced leader trapping)

Here you find expression profiling and splicing data corresponding to the recently accepted manuscript “Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei” by Nilson et al..

We use this database for our expression/splicing analysis. The data found in the SLT database can also be accessed through the much better curated and much more comprehensive TriTryp database and GEO.


KISS (Kinetoplast RNA editing sequence search tool)

Is a workbench for the analysis of RNA editing and a well annotated set of gRNAs for T. brucei (Ochsenreiter et al. 2006)

Splicer is a platform to analyze nuclear and Mitochondrial gene expression in t. Brucei